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  "Package": "crispRdesignR",
  "Type": "Package",
  "Title": "Guide Sequence Design for CRISPR/Cas9",
  "Version": "1.1.7",
  "Encoding": "UTF-8",
  "Authors@R": "c(\nperson(\"Dylan\", \"Beeber\", email = \"dylan.beeber@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(\"Frederic\", \"Chain\", role = \"aut\"))",
  "Description": "Designs guide sequences for CRISPR/Cas9 genome editing and\nprovides information on sequence features pertinent to guide\nefficiency. Sequence features include annotated off-target\npredictions in a user-selected genome and a predicted\nefficiency score based on the model described in Doench et al.\n(2016) <doi:10.1038/nbt.3437>. Users are able to import\nadditional genomes and genome annotation files to use when\nsearching and annotating off-target hits. All guide sequences\nand off-target data can be generated through the 'R' console\nwith sgRNA_Design() or through 'crispRdesignR's' user interface\nwith crispRdesignRUI(). CRISPR (Clustered Regularly Interspaced\nShort Palindromic Repeats) and the associated protein Cas9\nrefer to a technique used in genome editing.",
  "URL": "<https://github.com/dylanbeeber/crispRdesignR>",
  "License": "GPL-3",
  "RoxygenNote": "7.1.0",
  "Config/pak/sysreqs": "cmake make libbz2-dev libicu-dev liblzma-dev\nlibuv1-dev libxml2-dev libssl-dev xz-utils zlib1g-dev",
  "Repository": "https://dylanbeeber.r-universe.dev",
  "Date/Publication": "2023-04-13 13:25:43 UTC",
  "RemoteUrl": "https://github.com/dylanbeeber/crisprdesignr",
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  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-22 07:14:04 UTC",
    "User": "root"
  },
  "Author": "Dylan Beeber [aut, cre],\nFrederic Chain [aut]",
  "Maintainer": "Dylan Beeber <dylan.beeber@gmail.com>",
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  "_published": "2026-05-22T07:17:43.746Z",
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    "author": "Dylan Beeber <dylan.beeber@gmail.com>",
    "committer": "Dylan Beeber <dylan.beeber@gmail.com>",
    "message": "Reworked example\n",
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    "email": "dylan.beeber@gmail.com",
    "login": "dylanbeeber",
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      "role": "Imports"
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      "role": "Imports"
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      "role": "Imports"
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    {
      "package": "shiny",
      "role": "Imports"
    },
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      "role": "Imports"
    },
    {
      "package": "BSgenome.Scerevisiae.UCSC.sacCer3",
      "role": "Suggests"
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  "_owner": "dylanbeeber",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 16,
  "_contributors": [
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      "count": 277,
      "uuid": 38253997
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    "name": "Dylan Beeber"
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  "_downloads": {
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/crispRdesignR"
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  "_devurl": "https://github.com/dylanbeeber/crisprdesignr",
  "_searchresults": 7,
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  "_assets": [
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    "extra/readme.md",
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  "_homeurl": "https://github.com/dylanbeeber/crisprdesignr",
  "_realowner": "dylanbeeber",
  "_cranurl": true,
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      "date": "2020-05-26"
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      "date": "2021-01-11"
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      "date": "2023-04-12"
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    "Doench_2016_processing",
    "getofftargetdata",
    "getsgRNAdata",
    "sgRNA_design",
    "sgRNA_design_function"
  ],
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    {
      "page": "crispRdesignRUI",
      "title": "UI caller for crispRdesignR",
      "topics": [
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      ]
    },
    {
      "page": "Doench_2016_Processing",
      "title": "Donech 2016 Processsing",
      "topics": [
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      ]
    },
    {
      "page": "FindsgRNAfunction",
      "title": "sgRNA target design for Shiny App",
      "topics": [
        "sgRNA_design_function"
      ]
    },
    {
      "page": "getofftargetdata",
      "title": "Off Target Data Frame Creation",
      "topics": [
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      ]
    },
    {
      "page": "getsgRNAdata",
      "title": "sgRNA Data Frame Creation",
      "topics": [
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      ]
    },
    {
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      "title": "sgRNA Target Design",
      "topics": [
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      ]
    }
  ],
  "_readme": "https://github.com/dylanbeeber/crisprdesignr/raw/HEAD/README.md",
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